Toyopearl and TSK-GEL polymeric ion exchange resins utilize an aqueous buffer solution whose pH is between the pI of the target protein and the pKa of the resin. Protein elution occurs by either increasing the salt strength of the buffer or a change in the buffer pH itself during the run. The strong ionic interactions give IEC resins very high dynamic binding capacities (DBC). This makes them ideal for any stage in the purification process but more often used for the Capture step.

Toyopearl and TSK-GEL polymeric HIC resins utilize a decreasing salt gradient buffer system for elution. A high initial salt concentration promotes binding between a protein's surface hydrophobic patches and the resin's hydrophobic ligand. Resin ligand density is less than a reversed phase resin. This allows an organic solvent free elution mechanism with high mass and biological activity recoveries. Tosoh's advanced resin design has created HIC resins with DBCs approaching those of reversed phase materials, with developers frequently using them for Intermediate and Polishing purification steps.

Toyopearl polymeric AFC resins are available in a variety of group specific ligands. In addition, activated and reactive forms are available for the immobilization of target specific ligands. In AFC the mechanism of binding and elution varies depending on the immobilized ligand used. In some cases such as with Toyopearl AF-Chelate-650M (for Immobilized Metal Affinity Chromatography or IMAC) the binding and elution mechanism may change through the use of different metals or chemical modifiers. DBC values for AFC materials vary with ligand and are typically on the low side. However, because AFC has high selectivity and most of the capacity is used for the target, with feedstock impurities remaining unbound, AFC resins are typically used for the Capture and Intermediate purification steps of a manufacturing process.